PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG058290.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 154aa MW: 17772.2 Da PI: 9.7896

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG058290.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	26.6	1.8e-08	16	36	5	25
YABBY 5 ssseqvCyvqCnfCntilavs 25 +e+vCyv+CnfCntila + TRIDC5BG058290.1 16 APPEHVCYVHCNFCNTILAEN 36 679***************976 PP
2	YABBY	136.4	3.5e-42	34	129	72	170
YABBY 72 leelkveeenlksnvekeesastsvsseklsened.eevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +e+ k ++ +++ n+ + ++s+++ +++s+++d e++ + +rPPekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahf TRIDC5BG058290.1 34 AENFKAHNISFRGNYPDYGTSSKYRMPMMFSTKSDqEHMLH----MRPPEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHF 122 57888899999999999988888877767766555055554....8********************************************* PP YABBY 164 Pkihfgl 170 P+ihfgl TRIDC5BG058290.1 123 PNIHFGL 129 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
RYLATSAREI MSAQIAPPEH VCYVHCNFCN TILAENFKAH NISFRGNYPD YGTSSKYRMP 60 MMFSTKSDQE HMLHMRPPEK RQRVPSAYNR FIKEEIRRIK TNNPDISHRE AFSTAAKNWA 120 HFPNIHFGLG SNESSKKLDE AIAAPIPQKV QGLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	2e-43	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG058290.1