PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058290.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 187aa    MW: 21377.6 Da    PI: 9.7409
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058290.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY192.22.4e-592316221170
             YABBY  21 ilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl.senedeevprv 112
                        l vsvPs+s++++vtvrCGhCtsllsvnl+   q  ++++h         +e+ k ++ +++ n+  + ++s+++  +++ +++++e++ ++
  TRIDC5BG058290.5  23 PLQVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRMPMMFsTKSDQEHMLHM 107
                       589**************************************9........7899999*********999999888877677345566677776 PP

             YABBY 113 ppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        p    PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl
  TRIDC5BG058290.5 108 RP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 162
                       55...6**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MFLPFCLSCF AVWFQLVIFF SCPLQVSVPS NSMLNIVTVR CGHCTSLLSV NLRGLIQSPP  60
VQDHSQENFK AHNISFRGNY PDYGTSSKYR MPMMFSTKSD QEHMLHMRPA PEKRQRVPSA  120
YNRFIKEEIR RIKTNNPDIS HREAFSTAAK NWAHFPNIHF GLGSNESSKK LDEAIAAPIP  180
QKVQGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.15e-52YABBY family protein