PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058290.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 186aa    MW: 21052 Da    PI: 9.4738
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058290.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY234.52.4e-7261615170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                         +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+   q  ++++h         +e+ k ++ +++ n+  + ++s+++ 
  TRIDC5BG058290.6   6 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRM 90 
                       679******************************************************9........7899999*********99999988887 PP

             YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        +++ +++++e++ ++ p    PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl
  TRIDC5BG058290.6  91 PMMFsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 161
                       767734556667777655...6**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MSAQIAPPEH VCYVHCNFCN TILAVSVPSN SMLNIVTVRC GHCTSLLSVN LRGLIQSPPV  60
QDHSQENFKA HNISFRGNYP DYGTSSKYRM PMMFSTKSDQ EHMLHMRPAP EKRQRVPSAY  120
NRFIKEEIRR IKTNNPDISH REAFSTAAKN WAHFPNIHFG LGSNESSKKL DEAIAAPIPQ  180
KVQGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.18e-63YABBY family protein