PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG058510.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YA

Protein Properties

Length: 324aa MW: 34814.1 Da PI: 9.4577

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG058510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	97.9	1.1e-30	163	219	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d+p+YVNaKQy++Il+RR +Rak+e+e++l k+rkpylheSRh+hA+rR+Rg+gGrF TRIDC5BG058510.1 163 DAPIYVNAKQYEGILRRRRARAKVERENQL-VKGRKPYLHESRHRHAMRRARGTGGRF 219 68**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MMSFKGHEGF GQASNGGGGP VPWWTVSQML YGDPGAALSS SPEAEARRDG QFQVVPRAQG 60 ILDPAPPPPA PRSGAPEVLK FSVFQGNLES GGNKGEKALE HSATIALQSP LPEYNSRFEF 120 GPGPSMMSSG YPSADQCYGL LTTYAMKSTP GGRLLLPLNA TADAPIYVNA KQYEGILRRR 180 RARAKVEREN QLVKGRKPYL HESRHRHAMR RARGTGGRFL NTKKEGGGKD TPGGGKRADC 240 APPTRFATSP SSVIPQSRSS ISSLSGSEVS SMYDHDDVDH YNSIEHLRTP FFTPLPIIMD 300 GEHGASAPFK WATAADGCCE LLKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	213	RHRHAMRRAR
2	226	235	GGGKDTPGGG
3	227	236	GGGKDTPGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14020.1	2e-22	NF-YA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG058510.1