PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG059120.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 407aa MW: 43977.3 Da PI: 10.5911

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG059120.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.9	1.3e-16	274	320	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq TRIDC5BG059120.5 274 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKTLQ 320 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
WATSPGHSAK TMTSWSCCGA TAMSSCRARV IGSCRRGLRR FRRRRWCKKT RPACGSRSPS 60 LTRSTRTSSR TSSAKNHRGR PASDLMPPPK STHVSCSSRQ QSMSLADCGD NAGGFQSDLV 120 QARAGKAAME EGASSTLSAM GASFCGSNQV QVQGAVSDHG RAGHATAYGD GGAGSALHSA 180 VGSVNANARG RGHEATVASS SGRSNYSFGV TATTTTTTGT EPTSTSNRSS KRKRGLDTED 240 SESPSEDAES ESLVLERKPP QKLTTARRSR AAEVHNLSER RRRDRINEKM RALQELIPHC 300 NKTDKASMLD EAIEYLKTLQ MQVQMMWMGS GMAPPAVMFP GMQMHQYLPQ MGPSMARMPF 360 MAPPQQGHGV SLPEQYAHFL GVNPHHHLQP PAHHHQHFAQ GLGYYPL

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

WATSPGHSAK TMTSWSCCGA TAMSSCRARV IGSCRRGLRR FRRRRWCKKT RPACGSRSPS  60
LTRSTRTSSR TSSAKNHRGR PASDLMPPPK STHVSCSSRQ QSMSLADCGD NAGGFQSDLV  120
QARAGKAAME EGASSTLSAM GASFCGSNQV QVQGAVSDHG RAGHATAYGD GGAGSALHSA  180
VGSVNANARG RGHEATVASS SGRSNYSFGV TATTTTTTGT EPTSTSNRSS KRKRGLDTED  240
SESPSEDAES ESLVLERKPP QKLTTARRSR AAEVHNLSER RRRDRINEKM RALQELIPHC  300
NKTDKASMLD EAIEYLKTLQ MQVQMMWMGS GMAPPAVMFP GMQMHQYLPQ MGPSMARMPF  360
MAPPQQGHGV SLPEQYAHFL GVNPHHHLQP PAHHHQHFAQ GLGYYPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	284	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-36	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG059120.5