PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG060180.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 343aa MW: 37822.9 Da PI: 5.1801

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG060180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106	2.9e-33	52	143	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+ye+++d+++++++sw gn+fvv+d + f+ +Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++ weF+ + F +g+kell TRIDC5BG060180.2 52 FLNKTYEVVDDHSTDTIVSWGVAGNTFVVWDAHAFSMVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAAEGFLRGQKELL 135 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r++ TRIDC5BG060180.2 136 KTIRRRRP 143 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
FAGAAADGYS PSSWGSSPSS WGSSPSSWAG GGALAELPRP MDGLGEAGPT PFLNKTYEVV 60 DDHSTDTIVS WGVAGNTFVV WDAHAFSMVL LPRYFKHSNF SSFVRQLNTY GFRKVDPDRW 120 EFAAEGFLRG QKELLKTIRR RRPQSSPSGT PALQQQQQGQ QQEACLEVGH FGPEGEVQRL 180 HRDKGTLIAE VVKLRQEQQV TRAQMQEMEA RLAATEQKQQ QMTAFLARAM KSPSFLQMLV 240 ERQDQSRRKE LADALLSKKR GRPIEYLLRR NGETSYSAPA QGYGPGLADG GEGRRADGED 300 TESFWKELLS LGLEERHREA GGAGGDASGA EVDNDVEDEV DEL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

FAGAAADGYS PSSWGSSPSS WGSSPSSWAG GGALAELPRP MDGLGEAGPT PFLNKTYEVV  60
DDHSTDTIVS WGVAGNTFVV WDAHAFSMVL LPRYFKHSNF SSFVRQLNTY GFRKVDPDRW  120
EFAAEGFLRG QKELLKTIRR RRPQSSPSGT PALQQQQQGQ QQEACLEVGH FGPEGEVQRL  180
HRDKGTLIAE VVKLRQEQQV TRAQMQEMEA RLAATEQKQQ QMTAFLARAM KSPSFLQMLV  240
ERQDQSRRKE LADALLSKKR GRPIEYLLRR NGETSYSAPA QGYGPGLADG GEGRRADGED  300
TESFWKELLS LGLEERHREA GGAGGDASGA EVDNDVEDEV DEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-87	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG060180.2