PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG061940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 263aa    MW: 28236 Da    PI: 9.515
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG061940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.6e-05169214454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       + n+r r R +r+ +++  L++l+ +      +K + a++L +A  YI+ L
  TRIDC5BG061940.1 169 TSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 214
                       679***********************8.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MVKEEEVMAE AGGRGYLDML GLGEEAMADY FLCLSPSTSS HLSSAAVSTT TTSASTHAVA  60
SPTCASYLQP PPAAPCHQVL SFGGRAEQQY HGGDVFGFQY YYYGGAHAVP VAVPQKSSPT  120
TDCSSSISSM SSSPTATAAS AISTSKPQPA KKRGSRGSSD PRKAAPAATS NKRPRARKER  180
LGERILALQQ LVSPFGKTDT ASVLHEALGY IRFLHDQVQV RTHRLRRYRF RAACMLTLSL  240
LFFFLGCCQV LSSPYMQRLP PSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.15e-20bHLH family protein