PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063800.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 358aa MW: 39963.7 Da PI: 6.3539

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.3e-50	36	170	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++ TRIDC5BG063800.1 36 LPGYRFHPTDEELVTFYLRRKVAKKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIY 127 69*************************.99***********445556889*********************************** PP NAM 94 sk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +g +glkk+Lv+y+g+a kg+ktdW+mhe+rl TRIDC5BG063800.1 128 SAtsggsgsgSGVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170 9887777666666**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MMVGKAEMSA MEMEKVMSDG EVVLGGAGEE EDDVVLPGYR FHPTDEELVT FYLRRKVAKK 60 SLRIEVIREM DIYKHDPWDL PKASTVGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120 GIDRPIYSAT SGGSGSGSGV SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAAAAATNA 180 SPSMQEAEVW TICRIFRRTI TYRKQQTWRP APAPSTTITA ADSSSNTGSF ESSEGGDEYM 240 NCLQAPAAAA PYISQHQHPQ QYVSQTGTVD SGNFFYRDTM HNQQFQEQWN SPPAAPEPEQ 300 KPLNPLSAAD SFHQNEHNLT VAPNDFHKVE ALDGYLEEIA RMMEVTDPCH RNPNPVCN

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MMVGKAEMSA MEMEKVMSDG EVVLGGAGEE EDDVVLPGYR FHPTDEELVT FYLRRKVAKK  60
SLRIEVIREM DIYKHDPWDL PKASTVGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT  120
GIDRPIYSAT SGGSGSGSGV SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAAAAATNA  180
SPSMQEAEVW TICRIFRRTI TYRKQQTWRP APAPSTTITA ADSSSNTGSF ESSEGGDEYM  240
NCLQAPAAAA PYISQHQHPQ QYVSQTGTVD SGNFFYRDTM HNQQFQEQWN SPPAAPEPEQ  300
KPLNPLSAAD SFHQNEHNLT VAPNDFHKVE ALDGYLEEIA RMMEVTDPCH RNPNPVCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-74	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063800.1