PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 819aa MW: 93507.9 Da PI: 6.1951

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.5	2.6e-24	46	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.1 46 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 132 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 819 aa Download sequence
LPFVQPESKE YEIVEAEQDP ETEVVAGPGG EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR 60 KGCSEKTANN VTKSRAYVCS KEGFRPKSFT AEPKKQRAET RTGCEAHMTV KITTSGKYVV 120 TECVADHNHD LEAPVVDIQI LRSQKLLAKL QQPPDPPKVV LIPNDYKNYV RTRHTTDMQL 180 GDARAISEYL QRMKGENPSF FCSIQVDEDD QFRNVFWADV KSVMDFNYFG DVVCVDTRYS 240 ISDYCRPLLL FIGVNHHKQP TIFGTAFIYD ESVESFKWLF ETFKSAMSGK QPRTVLTDRS 300 TAISDAVASA WPGTAHRFSL LHLYQNATKV LSDTFQGSET FAHDFSRSLY DYEEGDFLSS 360 WEILLAKYNL KDNEWLSKLY EDRERWALPY GRDIFCADIA ATLRSDNMDA ILTGVLKTEI 420 DLPYFFSRYD KFLEEKRLAE QEADYLGVQM TQRVPPLRLL WQAANTYTPA LFELFRLEFE 480 LVLACMVYCC GEIGPISEYE VTVKNRPQVH FVRFDSSEYM VLCSCKKFEF VGLPCCHALK 540 VLEIKNIKEL PPQYILKRWR KDAQSESPKE NFGFAAAGED PKFTVSKRHN SLYRTLYKVA 600 AKAAEDIEGQ RFMESQYDQL LEQVELLLQA KLHDKPSLST IMRSQQPNLP QNDTSNSEPR 660 RASSKKNKNV ENRRQQQSPL ESSKKKKGRQ GLVEPEEAEL PLRVLAPTIS NDIPNHMSTP 720 TNQFLAPSHL MQAPYVTQQF GLNSLQGFSG MSPFGQMQEQ SPVHLQQPHL QQPPFHSGPQ 780 MHQAPPPDIQ SLQFLSSNPQ LGHQTTDQGQ YTIPVWDFL

Sequence ? help Back to Top

Protein Sequence Length: 819 aa Download sequence

LPFVQPESKE YEIVEAEQDP ETEVVAGPGG EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR  60
KGCSEKTANN VTKSRAYVCS KEGFRPKSFT AEPKKQRAET RTGCEAHMTV KITTSGKYVV  120
TECVADHNHD LEAPVVDIQI LRSQKLLAKL QQPPDPPKVV LIPNDYKNYV RTRHTTDMQL  180
GDARAISEYL QRMKGENPSF FCSIQVDEDD QFRNVFWADV KSVMDFNYFG DVVCVDTRYS  240
ISDYCRPLLL FIGVNHHKQP TIFGTAFIYD ESVESFKWLF ETFKSAMSGK QPRTVLTDRS  300
TAISDAVASA WPGTAHRFSL LHLYQNATKV LSDTFQGSET FAHDFSRSLY DYEEGDFLSS  360
WEILLAKYNL KDNEWLSKLY EDRERWALPY GRDIFCADIA ATLRSDNMDA ILTGVLKTEI  420
DLPYFFSRYD KFLEEKRLAE QEADYLGVQM TQRVPPLRLL WQAANTYTPA LFELFRLEFE  480
LVLACMVYCC GEIGPISEYE VTVKNRPQVH FVRFDSSEYM VLCSCKKFEF VGLPCCHALK  540
VLEIKNIKEL PPQYILKRWR KDAQSESPKE NFGFAAAGED PKFTVSKRHN SLYRTLYKVA  600
AKAAEDIEGQ RFMESQYDQL LEQVELLLQA KLHDKPSLST IMRSQQPNLP QNDTSNSEPR  660
RASSKKNKNV ENRRQQQSPL ESSKKKKGRQ GLVEPEEAEL PLRVLAPTIS NDIPNHMSTP  720
TNQFLAPSHL MQAPYVTQQF GLNSLQGFSG MSPFGQMQEQ SPVHLQQPHL QQPPFHSGPQ  780
MHQAPPPDIQ SLQFLSSNPQ LGHQTTDQGQ YTIPVWDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.1