PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 718aa MW: 82563.7 Da PI: 7.0956

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.8	2.1e-24	69	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.12 69 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 155 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MLSCSCSWQP LERRSKRLEK QNLQNEKKPE SKEYEIVEAE QDPETEVVAG PGGEPKVGMV 60 FLNEDKAYEF YVSYAGTAGF NVRKGCSEKT ANNVTKSRAY VCSKEGFRPK SFTAEPKKQR 120 AETRTGCEAH MTVKITTSGK YVVTECVADH NHDLEAPVVD IQILRSQKLL AKLQQPPDPP 180 KVVLIPNDYK NYVRTRHTTD MQLGDARAIS EYLQRMKGEN PSFFCSIQVD EDDQFRNVFW 240 ADVKSVMDFN YFGDVVCVDT RYSISDYCRP LLLFIGVNHH KQPTIFGTAF IYDESVESFK 300 WLFETFKSAM SGKQPRTVLT DRSTAISDAV ASAWPGTAHR FSLLHLYQNA TKVLSDTFQG 360 SETFAHDFSR SLYDYEEGDF LSSWEILLAK YNLKDNEWLS KLYEDRERWA LPYGRDIFCA 420 DIAATLRSDN MDAILTGVLK TEIDLPYFFS RYDKFLEEKR LAEQEADYLG VQMTQRVPPL 480 RLLWQAANTY TPALFELFRL EFELVLACMV YCCGEIGPIS EYEVTVKNRP QVHFVRFDSS 540 EYMVLCSCKK FEFVGLPCCH ALKVLEIKNI KELPPQYILK RWRKDAQSES PKENFGFAAA 600 GEDPKFTVSK RHNSLYRTLY KVAAKAAEDI EGQRFMESQY DQLLEQVELL LQAKLHDKPS 660 LSTIMRSQQP NLPQNDTSNS EPRRASSKKN KNVENRRQQQ SPLESSKKKK GRQGMFIT

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MLSCSCSWQP LERRSKRLEK QNLQNEKKPE SKEYEIVEAE QDPETEVVAG PGGEPKVGMV  60
FLNEDKAYEF YVSYAGTAGF NVRKGCSEKT ANNVTKSRAY VCSKEGFRPK SFTAEPKKQR  120
AETRTGCEAH MTVKITTSGK YVVTECVADH NHDLEAPVVD IQILRSQKLL AKLQQPPDPP  180
KVVLIPNDYK NYVRTRHTTD MQLGDARAIS EYLQRMKGEN PSFFCSIQVD EDDQFRNVFW  240
ADVKSVMDFN YFGDVVCVDT RYSISDYCRP LLLFIGVNHH KQPTIFGTAF IYDESVESFK  300
WLFETFKSAM SGKQPRTVLT DRSTAISDAV ASAWPGTAHR FSLLHLYQNA TKVLSDTFQG  360
SETFAHDFSR SLYDYEEGDF LSSWEILLAK YNLKDNEWLS KLYEDRERWA LPYGRDIFCA  420
DIAATLRSDN MDAILTGVLK TEIDLPYFFS RYDKFLEEKR LAEQEADYLG VQMTQRVPPL  480
RLLWQAANTY TPALFELFRL EFELVLACMV YCCGEIGPIS EYEVTVKNRP QVHFVRFDSS  540
EYMVLCSCKK FEFVGLPCCH ALKVLEIKNI KELPPQYILK RWRKDAQSES PKENFGFAAA  600
GEDPKFTVSK RHNSLYRTLY KVAAKAAEDI EGQRFMESQY DQLLEQVELL LQAKLHDKPS  660
LSTIMRSQQP NLPQNDTSNS EPRRASSKKN KNVENRRQQQ SPLESSKKKK GRQGMFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.12