PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG063970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 992aa    MW: 111389 Da    PI: 7.578
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG063970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.8e-072369249
              FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49
                      fY  Y++++GF+ r+ ++++s  +g +++++f C +  ++ ++ +k  
  TRIDC5BG063970.2 23 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNK-A 69
                      9*********************************998777666665.2 PP
2FAR177.23.3e-24343429190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +YA ++GF+vrk  s+k+  n+ +++r +vCskeg+r ++ ++  + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l 
  TRIDC5BG063970.2 343 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 429
                       6*****************9999.66669*************999877..9999**********************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 992 aa     Download sequence    
GEAASSAPEL GMEFDSVHDA KGFYYGYGER AGFKARTGSN RRSAGTGGMI MQRFLCCRGN  60
YSYRKGNKAK DSDPAKEVED GAAGGGGGEG KVEAPKKRGR KPGKKSTPVI EVENSVEKGV  120
AIAGAENGQA VPSTKNLGRG GDKKDVAEKD VESVIELEEE HVEVEDAAQD GAHDLGDGDD  180
AGSDAGEGVM EKEVEVKEKR GRGRPRKAVT EGNALQACVS TDLGVTASQC AVDERKKILN  240
KYLSKRQSRP ASGRPAKIVS RQALAERRKR GDGGRFLASD GPLPLERRSK RLEKQNLQNE  300
KKPESKEYEI VEAEQDPETE VVAGPGGEPK VGMVFLNEDK AYEFYVSYAG TAGFNVRKGC  360
SEKTANNVTK SRAYVCSKEG FRPKSFTAEP KKQRAETRTG CEAHMTVKIT TSGKYVVTEC  420
VADHNHDLEA PVVDIQILRS QKLLAKLQQP PDPPKVVLIP NDYKNYVRTR HTTDMQLGDA  480
RAISEYLQRM KGENPSFFCS IQVDEDDQFR NVFWADVKSV MDFNYFGDVV CVDTRYSISD  540
YCRPLLLFIG VNHHKQPTIF GTAFIYDESV ESFKWLFETF KSAMSGKQPR TVLTDRSTAI  600
SDAVASAWPG TAHRFSLLHL YQNATKVLSD TFQGSETFAH DFSRSLYDYE EGDFLSSWEI  660
LLAKYNLKDN EWLSKLYEDR ERWALPYGRD IFCADIAATL RSDNMDAILT GVLKTEIDLP  720
YFFSRYDKFL EEKRLAEQEA DYLGVQMTQR VPPLRLLWQA ANTYTPALFE LFRLEFELVL  780
ACMVYCCGEI GPISEYEVTV KNRPQVHFVR FDSSEYMVLC SCKKFEFVGL PCCHALKVLE  840
IKNIKELPPQ YILKRWRKDA QSESPKENFG FAAAGEDPKF TVSKRHNSLY RTLYKVAAKA  900
AEDIEGQRFM ESQYDQLLEQ VELLLQAKLH DKPSLSTIMR SQQPNLPQND TSNSEPRRAS  960
SKKNKNVENR RQQQSPLESS KKKKGRQGMF IT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199207KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-103FAR1 family protein