PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 765aa    MW: 85374.3 Da    PI: 5.5675
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.58.3e-1233957641373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.14 395 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 483
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.14 484 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 574
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.14 575 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 666
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.14 667 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 757
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.14 758 LVVSSAW 764
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    
NTMIKHANTS VPGDEIYSYW VPEDNCEILF NDFYDLVGKM TDNYVPYSVN NVNQFPQHKV  60
NNWKKSAYKK FDERESSGGL TPDYFMNDGR PVRAMPLNND AGPSIQARTA WQYPTDMTAQ  120
QELGERQAAS LPNGIYEPPR QIMVGFPESG GTTTVERQDL AVKVQEAITD PFVVKDHRSA  180
LNGKRYPPSK EEAVHRLENI SLKGKHCNDL ADKNITTVKR LMRHYHRDKS GLQKVPADEM  240
ITRAILTDEQ SDNFSTIDSL GNCLTGHGQH DASVMQANIL NDQGSLLAQP TPFHNFLPVP  300
ADEMITRASL TDEQTEYFST TDSLGNFLTG HGQPDASMTQ TNILNDLVSL SAQPTPLHNF  360
LSVPADEMIP RASLTDEQTE YFSTTDSLGI NTGDLKQVII ACGKAAAGNG IYETEVLISE  420
LRQLVSISGD PMQRLGAYML QGLVARLSSS GSKLYKSLKC KEPTNSELMS YMHHLCEMCP  480
SYKFGYMSAN GAIAEAIKGQ NFVHIIDFQI AQGSQWITII QALAARPRGP PCLRITAIDD  540
SNSAYARGGG LDMVGTRLHS VSASCGMPFE FNAVHAVSHE VYLEHLDIRP GEVIVVNFAY  600
ELHHSPDESL SVENHRDRII RMIKSLSPMV VTLVEQESNT NTTQFFPRYM ETLDYYTAMF  660
ESIDVALPRD AKIRVNTEQH CLGRDIISLI ACEGAERVER HEVFGTWKAR FAMAGFRPYP  720
LSSVVNNTIK TLLDGYDSCY RLEERDGVLY LGWKNRVLVV SSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-170GRAS family protein