PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 672aa    MW: 74526.2 Da    PI: 5.5583
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4025.9e-1233026711373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.15 302 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 390
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.15 391 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 481
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.15 482 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 573
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.15 574 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 664
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.15 665 LVVSSAW 671
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
EVPLNNDAGP SIQARTAWQY PTDMTAQQEL GERQAASLPN GIYEPPRQIM VGFPESGGTT  60
TVERQDLAVK VQEAITDPFV VKDHRSALNG KRYPPSKEEA VHRLENISLK GKHCNDLADK  120
NITTVKRLMR HYHRDKSGLQ KVPADEMITR AILTDEQSDN FSTIDSLGNC LTGHGQHDAS  180
VMQANILNDQ GSLLAQPTPF HNFLPVPADE MITRASLTDE QTEYFSTTDS LGNFLTGHGQ  240
PDASMTQTNI LNDLVSLSAQ PTPLHNFLSV PADEMIPRAS LTDEQTEYFS TTDSLGINTG  300
DLKQVIIACG KAAAGNGIYE TEVLISELRQ LVSISGDPMQ RLGAYMLQGL VARLSSSGSK  360
LYKSLKCKEP TNSELMSYMH HLCEMCPSYK FGYMSANGAI AEAIKGQNFV HIIDFQIAQG  420
SQWITIIQAL AARPRGPPCL RITAIDDSNS AYARGGGLDM VGTRLHSVSA SCGMPFEFNA  480
VHAVSHEVYL EHLDIRPGEV IVVNFAYELH HSPDESLSVE NHRDRIIRMI KSLSPMVVTL  540
VEQESNTNTT QFFPRYMETL DYYTAMFESI DVALPRDAKI RVNTEQHCLG RDIISLIACE  600
GAERVERHEV FGTWKARFAM AGFRPYPLSS VVNNTIKTLL DGYDSCYRLE ERDGVLYLGW  660
KNRVLVVSSA WC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-172GRAS family protein