PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 904aa    MW: 101608 Da    PI: 6.3703
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4011.2e-1225349031373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.19 534 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 622
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.19 623 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 713
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.19 714 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 805
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.19 806 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 896
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.19 897 LVVSSAW 903
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 904 aa     Download sequence    
DGQTIAVKKI YDMPGVDEEQ FQNEFKNLAR LQHRNIVRLV GYCHHIEEVP AMYEGKLVLA  60
EKIHRALCLE YMSNGSLEKY ISDECDKYDW HTGYGIIKGI CQGLKYLHTK LEPPIYHLDL  120
KPANILLDEN MVPRIADFGI SRLFGDERTR ATKSTLGTQG YLPPEYIRNY LISSKFDIFS  180
LGVVIIKIMA GRAGYYKSAE MSSHEFINVV QENWTNRPHE TSSLMKAYSK QVKICIEIGL  240
SCVQEDRHKR PTVQNIVDRL NETETECTCV YKKFEVQENS GGLTPNYFMN NGRSVSEVPL  300
NNDAGPSIQA RTAWQYPTDM TAQQELGERQ AASLPNGIYE PPRQIMVGFP ESGGTTTVER  360
QDLAVKVQEA ITDPFVVKDH RSALNGKRYP PSKEEAVHRL ENISLKGKHC NDLADKNITT  420
VKRLMRHYHR DKSGLQKVPA DEMITRASLT DEQTEYFSTT DSLGNFLTGH GQPDASMTQT  480
NILNDLVSLS AQPTPLHNFL SVPADEMIPR ASLTDEQTEY FSTTDSLGIN TGDLKQVIIA  540
CGKAAAGNGI YETEVLISEL RQLVSISGDP MQRLGAYMLQ GLVARLSSSG SKLYKSLKCK  600
EPTNSELMSY MHHLCEMCPS YKFGYMSANG AIAEAIKGQN FVHIIDFQIA QGSQWITIIQ  660
ALAARPRGPP CLRITAIDDS NSAYARGGGL DMVGTRLHSV SASCGMPFEF NAVHAVSHEV  720
YLEHLDIRPG EVIVVNFAYE LHHSPDESLS VENHRDRIIR MIKSLSPMVV TLVEQESNTN  780
TTQFFPRYME TLDYYTAMFE SIDVALPRDA KIRVNTEQHC LGRDIISLIA CEGAERVERH  840
EVFGTWKARF AMAGFRPYPL SSVVNNTIKT LLDGYDSCYR LEERDGVLYL GWKNRVLVVS  900
SAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-168GRAS family protein