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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5BG064000.30 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | GRAS | ||||||||
| Protein Properties | Length: 405aa MW: 45129.5 Da PI: 5.7618 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 404.3 | 1.2e-123 | 35 | 404 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++++++c +a + + +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e + se +++++ + e++P +k
TRIDC5BG064000.30 35 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 123
57899****************************************************************9...8999999999********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s + l +g rL+++ +++g+pfefn+ v
TRIDC5BG064000.30 124 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 214
*********************************************************988899999************************.6 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+ +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++
TRIDC5BG064000.30 215 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 306
77889999************************************************************************************ PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll ++s yr+ee++g l+lgWk+r
TRIDC5BG064000.30 307 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 397
***********************************************************************55.****************** PP
GRAS 367 LvsvSaW 373
Lv+ SaW
TRIDC5BG064000.30 398 LVVSSAW 404
******* PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 405 aa Download sequence |
DLVPADEMIP RASLTDEQTE YFSTTDSLGI NTGDLKQVII ACGKAAAGNG IYETEVLISE 60 LRQLVSISGD PMQRLGAYML QGLVARLSSS GSKLYKSLKC KEPTNSELMS YMHHLCEMCP 120 SYKFGYMSAN GAIAEAIKGQ NFVHIIDFQI AQGSQWITII QALAARPRGP PCLRITAIDD 180 SNSAYARGGG LDMVGTRLHS VSASCGMPFE FNAVHAVSHE VYLEHLDIRP GEVIVVNFAY 240 ELHHSPDESL SVENHRDRII RMIKSLSPMV VTLVEQESNT NTTQFFPRYM ETLDYYTAMF 300 ESIDVALPRD AKIRVNTEQH CLGRDIISLI ACEGAERVER HEVFGTWKAR FAMAGFRPYP 360 LSSVVNNTIK TLLDGYDSCY RLEERDGVLY LGWKNRVLVV SSAWC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G48150.1 | 1e-175 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5BG064000.30 |




