PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.31
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 398aa    MW: 44389.7 Da    PI: 6.2344
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.31genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.41.1e-123283971373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.31  28 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 116
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.31 117 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 207
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.31 208 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 299
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.31 300 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 390
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.31 391 LVVSSAW 397
                        ******* PP

Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MIPRASLTDE QTEYFSTTDS LGINTGDLKQ VIIACGKAAA GNGIYETEVL ISELRQLVSI  60
SGDPMQRLGA YMLQGLVARL SSSGSKLYKS LKCKEPTNSE LMSYMHHLCE MCPSYKFGYM  120
SANGAIAEAI KGQNFVHIID FQIAQGSQWI TIIQALAARP RGPPCLRITA IDDSNSAYAR  180
GGGLDMVGTR LHSVSASCGM PFEFNAVHAV SHEVYLEHLD IRPGEVIVVN FAYELHHSPD  240
ESLSVENHRD RIIRMIKSLS PMVVTLVEQE SNTNTTQFFP RYMETLDYYT AMFESIDVAL  300
PRDAKIRVNT EQHCLGRDII SLIACEGAER VERHEVFGTW KARFAMAGFR PYPLSSVVNN  360
TIKTLLDGYD SCYRLEERDG VLYLGWKNRV LVVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-175GRAS family protein