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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5BG064000.31 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | GRAS | ||||||||
| Protein Properties | Length: 398aa MW: 44389.7 Da PI: 6.2344 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 404.4 | 1.1e-123 | 28 | 397 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++++++c +a + + +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e + se +++++ + e++P +k
TRIDC5BG064000.31 28 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 116
57899****************************************************************9...8999999999********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s + l +g rL+++ +++g+pfefn+ v
TRIDC5BG064000.31 117 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 207
*********************************************************988899999************************.6 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+ +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++
TRIDC5BG064000.31 208 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 299
77889999************************************************************************************ PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll ++s yr+ee++g l+lgWk+r
TRIDC5BG064000.31 300 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 390
***********************************************************************55.****************** PP
GRAS 367 LvsvSaW 373
Lv+ SaW
TRIDC5BG064000.31 391 LVVSSAW 397
******* PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 398 aa Download sequence |
MIPRASLTDE QTEYFSTTDS LGINTGDLKQ VIIACGKAAA GNGIYETEVL ISELRQLVSI 60 SGDPMQRLGA YMLQGLVARL SSSGSKLYKS LKCKEPTNSE LMSYMHHLCE MCPSYKFGYM 120 SANGAIAEAI KGQNFVHIID FQIAQGSQWI TIIQALAARP RGPPCLRITA IDDSNSAYAR 180 GGGLDMVGTR LHSVSASCGM PFEFNAVHAV SHEVYLEHLD IRPGEVIVVN FAYELHHSPD 240 ESLSVENHRD RIIRMIKSLS PMVVTLVEQE SNTNTTQFFP RYMETLDYYT AMFESIDVAL 300 PRDAKIRVNT EQHCLGRDII SLIACEGAER VERHEVFGTW KARFAMAGFR PYPLSSVVNN 360 TIKTLLDGYD SCYRLEERDG VLYLGWKNRV LVVSSAWC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G48150.1 | 1e-175 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5BG064000.31 |




