PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064860.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 247aa    MW: 27116.7 Da    PI: 8.3444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064860.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.93.8e-1861107455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5BG064860.5  61 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 107
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
SGSNFGGSGL PSESGGHAHK RKGRGKDDYD SRSEDVECEA TEETKSSRRH GSKRRSRAAE  60
VHNQSERRRR DRINEKMRSL QELIPHCNKA DKASILDEAI EYLKSLQMQV QIMWMTTGMA  120
PMMFPGAHQF MPPMAVGMNS ACMPAAQGLN QMARMPYMNH SLSNHIPMNP SPAMNPMYIA  180
NQMQNIQLRE ASNHFLHPDS GLAVAPQVAG PYAYTPQVAP KSQIPEVPDC TVAPISGPGQ  240
PPAPDGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15370KRRSRAAEVHNQSERRRR
26671ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.29e-33bHLH family protein