PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064860.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 246aa    MW: 27029.7 Da    PI: 8.3444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064860.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.93.8e-1860106455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5BG064860.7  60 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 106
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
GSNFGGSGLP SESGGHAHKR KGRGKDDYDS RSEDVECEAT EETKSSRRHG SKRRSRAAEV  60
HNQSERRRRD RINEKMRSLQ ELIPHCNKAD KASILDEAIE YLKSLQMQVQ IMWMTTGMAP  120
MMFPGAHQFM PPMAVGMNSA CMPAAQGLNQ MARMPYMNHS LSNHIPMNPS PAMNPMYIAN  180
QMQNIQLREA SNHFLHPDSG LAVAPQVAGP YAYTPQVAPK SQIPEVPDCT VAPISGPGQP  240
PAPDGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15269KRRSRAAEVHNQSERRRR
26570ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-32bHLH family protein