PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG065190.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 259aa    MW: 28492.2 Da    PI: 6.2289
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG065190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.34.4e-12151231191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y+ e GF +r  ks+ +  +++i +++ +C ++gk+  e+++         +  ++C a +++ + +d+ w++++ +  HnH+l+p
  TRIDC5BG065190.1 151 DFYNLYSWEKGFGIRHGKSRLN-VERTICMQEIMCGCSGKAGVENTR---------SCCCECPALIRLLRAEDNGWYIAEHRDTHNHSLSP 231
                       6*****************9999.666699**********99887655.........899*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
DRIALHWHIS TFLEEVGGSS VPAPVRAEAS AAGIVVQPQV PLEEIAAKRL GAEDQPLDTG  60
EAQMMMVSEA GAERRDTSPP SSELSTGKMN PRAPGWNKRL LIGAVAPSCP PCPNCVSAFE  120
KAVWNYAENP RDHVVTPTIG TTFDSVGEGC DFYNLYSWEK GFGIRHGKSR LNVERTICMQ  180
EIMCGCSGKA GVENTRSCCC ECPALIRLLR AEDNGWYIAE HRDTHNHSLS PNFGETLQWP  240
SHKHIDAYTR DLVKQLCQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-11FAR1 family protein