PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG065540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 192aa    MW: 20756.4 Da    PI: 11.3124
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG065540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-1897146255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++GVr+++ +g++ AeIrdp     +  kr +lg+f+taeeAa+ ++ a+ +l+g
  TRIDC5BG065540.1  97 RFRGVRQRP-WGKYSAEIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAAVRLKG 146
                       69*******.**********9.....445***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGMSPADSLA AGRTRRAGSL APLPKRVCVF FVDADATESE SSGDEEVRRG KRRVRKVIDI  60
SVKASSQPSP ASSIPRRRAL LLRRRAAKAG DGGYRRRFRG VRQRPWGKYS AEIRDPSLQK  120
RLWLGTFDTA EEAAAVYDDA AVRLKGSHAV TNFSSSSSSD SDYVASNKPR SPPPAKLRPT  180
GEAAAEATAT VP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14856RRGKRRVRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.12e-08ERF family protein