PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG067320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 332aa    MW: 37214.6 Da    PI: 5.4781
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG067320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.82e-34391302102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+y++++d++++ ++sw++++nsfvv+d++ +a+ +Lp+yFkh nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC5BG067320.1  39 FLAKTYDMVDDPATDAVVSWTATSNSFVVWDPHLLATLLLPRYFKHGNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 122
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++ikr+k 
  TRIDC5BG067320.1 123 RNIKRRKP 130
                       ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSPVKVEGRR CPDPDPAAAA GGGAPRPMDG LGDAGPTPFL AKTYDMVDDP ATDAVVSWTA  60
TSNSFVVWDP HLLATLLLPR YFKHGNFSSF VRQLNTYGFR KVDPDRWEFA NEGFLRGQRH  120
LLRNIKRRKP THGSQNQHSL GSYLEVGNFG HDVEIDQLKR DKQLLMAEVV KLRQEQQNTR  180
SGLQAMEKRL QGTEQKQQQM MSFLARVMQN PVFIRQLISQ SEMRKELEDA MSNKRRRRID  240
QGPEAVDSMG NGSTLEQGSQ VMFEQQEPVD SLVNGVISDL ESSSVDTKGA EVQQSVASSR  300
SEQLRGRPSG ELNDDFWEDL LHEGGLGEES VE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234239KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.13e-95HSF family protein