PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG067320.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 310aa    MW: 35298.5 Da    PI: 5.4556
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG067320.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1101.7e-342932102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+y++++d++++ ++sw++++nsfvv+d++ +a+ +Lp+yFkh nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC5BG067320.3   2 FLAKTYDMVDDPATDAVVSWTATSNSFVVWDPHLLATLLLPRYFKHGNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 85 
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++ikr+k 
  TRIDC5BG067320.3  86 RNIKRRKP 93 
                       ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
PFLAKTYDMV DDPATDAVVS WTATSNSFVV WDPHLLATLL LPRYFKHGNF SSFVRQLNTY  60
GFRKVDPDRW EFANEGFLRG QRHLLRNIKR RKPTHGSQNQ HSLGSYLEVG NFGHDVEIDQ  120
LKRDKQLLMA EVVKLRQEQQ NTRSGLQAME KRLQGTEQKQ QQMMSFLARV MQNPVFIRQL  180
ISQSEMRKEL EDAMSNKRRR RIDQGPEAVD SMGNGSTLEQ GSQVMFEQQE PVDSLVNGVI  240
SDLESSSVDT KGAEVQQSVA SSRSEQLRGR PSGELNDDFW EDLLHEGGLG EEASNLVVPD  300
DMNLLAQKMD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.19e-93HSF family protein