PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG067470.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 245aa    MW: 28335.3 Da    PI: 7.2049
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG067470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.35e-12831641198
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         ++ +++p  f+++++   e +++++le+++  s+ + +   k+ g  vlt GW +Fv   gL+ gD++v++++g+s+f  +v +f+
  TRIDC5BG067470.1  83 DFQHEMIIPEVFVQRFK--CEFPREMILETQNCHSYVIGV--AKNNGNLVLTVGWGKFVGIFGLEMGDTIVLRYIGNSRF--NVIIFD 164
                       55678********9997..458889***************..**********************************9999..887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MFRYKGNSQF NVMIFDKLGR EKALSVVLDP FLHRVQDRRN EAHEIGSSQK MDVPWERCKS  60
RTEYHYANLD DEKKYFLVHM MGDFQHEMII PEVFVQRFKC EFPREMILET QNCHSYVIGV  120
AKNNGNLVLT VGWGKFVGIF GLEMGDTIVL RYIGNSRFNV IIFDELGCEK VSSVFVDPSP  180
PPVQERRTSA TDTVKSSHFR PQAIQTQAFS IRKEMPMESR HLQMETDKSC QDKNTVISTS  240
SCESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-10B3 family protein