PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG067500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 154aa    MW: 17432 Da    PI: 8.6153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG067500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.98.5e-1413105199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       f+ v+ + +v ++  l +p+++a+++  ++++s    l+ +     W v++  + + g+  l+ GWk+Fv++ +L+ gD+++Fkl + +e+++
  TRIDC5BG067500.1  13 FVVVMRKCNVVAEFYLAFPRHYAKKYLREEPQS----LQRPGRiGMWPVRF--CENNGGKRLKIGWKQFVEDTKLEMGDICLFKLLS-TERTM 98 
                       6667777888999999**********6565554....556544599*****..555556669**********************998.67778 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v ++++
  TRIDC5BG067500.1  99 QVYIIQA 105
                       9998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
SGWSDPYTEI PIFVVVMRKC NVVAEFYLAF PRHYAKKYLR EEPQSLQRPG RIGMWPVRFC  60
ENNGGKRLKI GWKQFVEDTK LEMGDICLFK LLSTERTMQV YIIQANYRAG PQNGADRRGA  120
PAHRADGACD PGSRLLHIAK TEAMEDDVVG PDGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-08B3 family protein