PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG068130.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 183aa    MW: 20235.6 Da    PI: 9.9342
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG068130.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.67e-18441002685
          trihelix  26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                       + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+  +     + p f  +
  TRIDC5BG068130.3  44 ALEPKWSAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAGA---REPSFWAM 100
                       5589****************************************86333...34667666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
PRRRPTRRCA PRGCPAGRGR RYWCSSRASA WLKSAAAGET AAAALEPKWS AVAEYCRRHG  60
VERGAVQCRK RWSNLAGDWK KIKEWERAAA GAREPSFWAM RNDARRERRL PGFFDREVYG  120
ILEGRGRGVV AGSSSGGGAA VEEVGVVRME EDDEEEETGE EEEERGKGKE VAVAVAGRRG  180
GRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.14e-35Trihelix family protein