PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG068130.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 239aa    MW: 26077.9 Da    PI: 5.0683
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG068130.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.81.2e-17551112685
          trihelix  26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                       + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+  +     + p f  +
  TRIDC5BG068130.4  55 ALEPKWSAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAGA---REPSFWAM 111
                       5589****************************************86333...34667666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
CPAPATPPAR RPRRRPTRRC APRGCPAGRG RRYWCSSRAS AWLKSAAAGE TAAAALEPKW  60
SAVAEYCRRH GVERGAVQCR KRWSNLAGDW KKIKEWERAA AGAREPSFWA MRNDARRERR  120
LPGFFDREVY GILEGRGRGV VAGSSSGGGA AVEEVGVVRM EEDDEEEETG EEEEERGKGK  180
EVAVAVAVKE TVFDSGRPAG EEVLFSEDEE EEDAETPEAT PAPPPAVIAL PISENSEAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11015RRPRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-34Trihelix family protein