PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG071780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 251aa    MW: 26517 Da    PI: 6.261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG071780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15e-1161107354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r+h e+E+rRR+ri+s +++Lr +l  +     +K +Ka+ L kAve +++L
  TRIDC5BG071780.1  61 RNHREAEKRRRERIKSHLDRLRAVLACD-----PKIDKATLLAKAVERVREL 107
                       68************************98.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MFPAEASFAG AEAAMLPPFF VGSMWQSAPG GGVAAALSEE DEVAAAAAAE AAHDRAVVAT  60
RNHREAEKRR RERIKSHLDR LRAVLACDPK IDKATLLAKA VERVRELKQR MAGVVGEAAA  120
PASHLFPTEH DEIVVLASGG GAGGAAAVFE ASLCCDDRSD LLPGLIDTLR ALRLRTLRAE  180
MATLGGRVRN VLVLARDAGE HADDDYSSSS EDGGADFLKE ALRALVERQG AAAGDRPKRR  240
RVADMNMQAA A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238242KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.12e-35bHLH family protein