PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG072170.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 238aa    MW: 26474.4 Da    PI: 10.4107
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG072170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.31.3e-52742001128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtd+elv +yL++k++g++l++  +i+evd+y+++Pw Lp ++  +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v 
  TRIDC5BG072170.1  74 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 165
                       79****************************.88***************77778999************************************* PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl
  TRIDC5BG072170.1 166 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 200
                       *********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
SEPSRPLPHP LPYLSPPPFT TTITTPHHSS LTTISTAIGI NSSSGAISST NKSADMGMPA  60
VRRRERDAEA ELNLPPGFRF HPTDDELVEH YLCRKAAGQR LPVPIIAEVD LYRFDPWALP  120
DRALFGTREW YFFTPRDRKY PNGSRPNRAA GNGYWKATGA DKPVAPRGGR TMGIKKALVF  180
YAGKAPKGVK TDWIMHEYRL ADAGRAAASK KGSLRVRDLI DWLLLLVDLV LIFRSLLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-74NAC family protein