PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG072170.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 261aa    MW: 27898.5 Da    PI: 10.7051
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG072170.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.91.6e-52191451128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtd+elv +yL++k++g++l++  +i+evd+y+++Pw Lp ++  +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v 
  TRIDC5BG072170.3  19 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 110
                       79****************************.88***************77778999************************************* PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl
  TRIDC5BG072170.3 111 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 145
                       *********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGMPAVRRRE RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD  60
PWALPDRALF GTREWYFFTP RDRKYPNGSR PNRAAGNGYW KATGADKPVA PRGGRTMGIK  120
KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR VPGRLGALPA LQQEERVGED  180
AAPAAGGRGD VPVALALVGR GAHAGVGDRR QRPVAVPAGG GVPGPEPRRR GGAPGDDGHA  240
DGAQEGGGGG GRQERPVRGP Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-76NAC family protein