PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG072170.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 254aa    MW: 28701.5 Da    PI: 8.9808
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG072170.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.5e-52171431128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtd+elv +yL++k++g++l++  +i+evd+y+++Pw Lp ++  +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v 
  TRIDC5BG072170.4  17 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 108
                       79****************************.88***************77778999************************************* PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl
  TRIDC5BG072170.4 109 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 143
                       *********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MPAVRRRERD AEAELNLPPG FRFHPTDDEL VEHYLCRKAA GQRLPVPIIA EVDLYRFDPW  60
ALPDRALFGT REWYFFTPRD RKYPNGSRPN RAAGNGYWKA TGADKPVAPR GGRTMGIKKA  120
LVFYAGKAPK GVKTDWIMHE YRLADAGRAA ASKKGSLRLD DWVLCRLYNK KNEWEKMQLQ  180
QQGGEEMSHS HSWGEARTPE SEIVDNDPSL FQQAAAFQAQ SPAAAAAHQE MMATLMVPKK  240
EAAEEAGRND LFVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-87NAC family protein