PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG072170.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 256aa    MW: 28967.8 Da    PI: 8.9593
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG072170.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.5e-52151411128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtd+elv +yL++k++g++l++  +i+evd+y+++Pw Lp ++  +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v 
  TRIDC5BG072170.6  15 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 106
                       79****************************.88***************77778999************************************* PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl
  TRIDC5BG072170.6 107 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 141
                       *********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
AVRRRERDAE AELNLPPGFR FHPTDDELVE HYLCRKAAGQ RLPVPIIAEV DLYRFDPWAL  60
PDRALFGTRE WYFFTPRDRK YPNGSRPNRA AGNGYWKATG ADKPVAPRGG RTMGIKKALV  120
FYAGKAPKGV KTDWIMHEYR LADAGRAAAS KKGSLRLDDW VLCRLYNKKN EWEKMQLQQQ  180
GGEEMMSHSH SWGEARTPES EIVDNDPSLF QQAAAFQAQS PAAAAAHQEM MATLMVPKKE  240
AAEEAGRNDL FVDLSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-87NAC family protein