PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG072230.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 351aa    MW: 37199.5 Da    PI: 9.7312
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG072230.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-18104153255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g++++eIrdp     + +r +lg+f+taeeAa+a++aa+ ++ g
  TRIDC5BG072230.4 104 RYRGVRQRR-WGKFASEIRDPI----QgRRLWLGTFDTAEEAAAAYDAAKIRISG 153
                       69****998.**********82....36*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGPNPSLDML AAAAGMESAA AAAAAEAQPR GRVVRIIVHD ADATDSSSSE DESAPPPLAT  60
MPTTKEELRR ERKKRRRVME AGRRDDSGLP HPPPSAGART PSVRYRGVRQ RRWGKFASEI  120
RDPIQGRRLW LGTFDTAEEA AAAYDAAKIR ISGSRRPADG FPFSFPPPEP AKPTVLRLPM  180
PQPAKPTILR LPMPQPAKRI TSPPPPPPPP EPAKPAISPP PLPAKPFALP LKLRLKLSFN  240
AQVKDKGWNW CSAGDVKEEE DGGCDGEAKV GDVSIAGEVK VEAGGCAGEV KVEGVGCCAD  300
ESKEAGGSSE VQAVKPMWAM ITGKRKKRSG CGTRVGALHA SSVCVEEVGG T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16977RRERKKRRR
27478KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-13ERF family protein