PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG073000.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 220aa    MW: 24731.4 Da    PI: 6.6315
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG073000.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.11.1e-1358108155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5BG073000.14  58 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 108
                        89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
AAARAYDRAA IKFRGLEADI NFNLSDYEED LKQMRNWTKE EFVHILRRQS TGFARGSSKY  60
RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD RAAIRFNGRE AVTNFESSSY  120
NGDAPPDAEN EAIVDADALD LDLRMSQPTA HDPKRDNIVA GLQLTFDSPE SSTTMLSSQP  180
MSSSSSQWPV HQHGTAVPPQ QHQRLYPSAC HGFYPNVQVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.33e-65AP2 family protein