PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG073000.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 248aa    MW: 27849 Da    PI: 6.513
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG073000.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.81.3e-1368118155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5BG073000.9  68 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 118
                       89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
LLRGGFDTAH AAARAYDRAA IKFRGLEADI NFNLSDYEED LKQMRNWTKE EFVHILRRQS  60
TGFARGSSKY RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD RAAIRFNGRE  120
AVTNFESSSY NGDAPPDAEN EAIVDADALD LDLRMSQPTA HDPKRDNIVA GLQLTFDSPE  180
SSTTMLSSQP MSSSSSQWPV HQHGTAVPPQ QHQRLYPSAC HGFYPNVQVQ VQERPMEARP  240
PEPPSCFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.35e-67AP2 family protein