PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG073500.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 186aa MW: 20462 Da PI: 10.0533

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG073500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg F + L H+r+H TRIDC5BG073500.1 126 HDCHICGLGFETGQALGGHMRRH 148 56********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
SMGAGMRRAR EEEVLSLALS LSTDSTSSST TSADSASAPV RKRARRGRVV ATSGEGEFVC 60 KTCGRAFASF QVLGGHRTRH LRGRHGLELG VGVARAIKER KRQEDKHEIH GPSFDEQRKR 120 QEDKQHDCHI CGLGFETGQA LGGHMRRHRE EMALSSAMDR WVALSGQEAG HQHAADRPPV 180 LLELFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46090.1	2e-10	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG073500.1