PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG074280.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 411aa    MW: 46490.9 Da    PI: 8.2526
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG074280.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.91.1e-10431053398
                        -SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  33 sktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        ++t  + ++ g ++W vk+  ++  ++ +l++GW +Fv a+g+ +g  +v++++   ++ l++k+f+
  TRIDC5BG074280.17  43 GRTALVLSPFGkNVWPVKV--DRDAKGAFLGDGWPQFVAAHGIGVGWYLVIRHE--GCGVLTLKAFN 105
                        44555566555599*****..*******************************65..57778888776 PP
2B346.18.8e-153444003286
                        --SEEEEEE.TTS-EEEEEE.....EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3  32 esktltled.esgrsWevkliy...rkksgr..yvltkGWkeFvkangLkegDfvvFkldg 86 
                        +  ++tl++ e+++sWev+        +  r    lt+GWk F+k+n+Lk+gD+++Fk+++
  TRIDC5BG074280.17 344 C--KITLKSvERNKSWEVEGVNyhpGTN--RsyNCLTRGWKAFCKENELKAGDICTFKVIK 400
                        3..7999998999******944455333..34489***********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MGLSSNCAKT IKVQQCVKLP DSNYLHIDDE LAGCFGTEDH GDGRTALVLS PFGKNVWPVK  60
VDRDAKGAFL GDGWPQFVAA HGIGVGWYLV IRHEGCGVLT LKAFNSSFVI KEFGLTITVL  120
SPAEIENAFA RKPQFIVPLQ RSFMEKMPIP PEFLQRGYIS EEDLNRPRPI ATFLTSWHIE  180
LKKDGPNVFF TGSEWPKFLA YFEIAETDVL LIKYQGCMNF SFETFPNGNN EHTEEKISSS  240
QQSEQSPAAQ CQEEEHVSTR TRKQNNGKTP GAQSQEEEHV CSRKRKQSEV KSMLDGPTTS  300
QHRKKALCEL GSTGSQAWLR KEINGLALKR YLHFPARFGF LERCKITLKS VERNKSWEVE  360
GVNYHPGTNR SYNCLTRGWK AFCKENELKA GDICTFKVIK STLWHVVIDR C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1282287SRKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.15e-07B3 family protein