PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG076000.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 164aa MW: 17488.1 Da PI: 10.8033

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG076000.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	61.5	1e-19	27	61	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp+g+ +LCnaCG++yrkk++ TRIDC5BG076000.2 27 CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRR 61 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MSSSVEKGSG SLDPGERPAA GSQPKACTAC NTTKTPLWRG GPSGPMSLCN ACGIRYRKKR 60 REAMGLEDPP KKRQPAAAAA PAAAAAACSE AGGESADPEQ QQPQQPKKKT TTTKRGREVE 120 LRVVGFGKEV VLKQRRRMRR RPRLGEEEKA AILLMALSSG VIYG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	QRRRMRR
2	135	141	RRRMRRR
3	136	142	RRRMRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	2e-22	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG076000.2