PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG076000.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 147aa    MW: 15930.5 Da    PI: 11.3307
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG076000.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.78.6e-202761135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C+ C+ttkTplWR gp+g+ +LCnaCG++yrkk++
  TRIDC5BG076000.3 27 CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRR 61
                      ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
FASICSQGSG SLDPGERPAA GSQPKACTAC NTTKTPLWRG GPSGPMSLCN ACGIRYRKKR  60
REAMGLEDPP KKRQPAAAAA PAAQQPQQPK KKTTTTKRGR EVELRVVGFG KEVVLKQRRR  120
MRRRPRLGEE EKAAILLMAL SSGVIYG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123QRRRMRR
2118124RRRMRRR
3119125RRRMRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-23GATA family protein