PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG077040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 355aa MW: 36920.1 Da PI: 6.1254

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG077040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.3	1.9e-36	74	173	6	98
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ka 90 r+ ++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLlqq++pai ++tgt++ +a ++ +++ + ++ss+ ++ TRIDC5BG077040.1 74 PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVRWLLQQSEPAIVAATGTGTVPAIAT-TVDGVLRIPTQSSSsassavvdDE 165 6999********************************************************88888444.222222222222221122222222 PP TCP 91 aksaaksk 98 a+++ +k TRIDC5BG077040.1 166 ASAKRRRK 173 22222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
ARRGICRMES EGQDMPPGEG EAQGHAGGVA EPGAMAMVPV PVRGGYMVVP KPEPVELFGG 60 AGAGGGMVVR KPPPRNRDRH TKVEGRGRRI RMPAACAARI FQLTRELGHK SDGETVRWLL 120 QQSEPAIVAA TGTGTVPAIA TTVDGVLRIP TQSSSSASSA VVDDEASAKR RRKLQPTRAA 180 GPLATVPPAA AYYSVLADPL LQGGAGGAAI SVASGLAPIG GQQGLVPVFA VPSAAGAAGG 240 NHMIPQATAV WMVPQPAGAP NQPTQYWAFQ SAPQLINLAG AQTMPPGAVF PNVAADYHQQ 300 QQSASTVVQN TNSDHQQFSH HLTGESHEQQ RRDHHPEEDD ADDDDEPVSD SSPED

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

ARRGICRMES EGQDMPPGEG EAQGHAGGVA EPGAMAMVPV PVRGGYMVVP KPEPVELFGG  60
AGAGGGMVVR KPPPRNRDRH TKVEGRGRRI RMPAACAARI FQLTRELGHK SDGETVRWLL  120
QQSEPAIVAA TGTGTVPAIA TTVDGVLRIP TQSSSSASSA VVDDEASAKR RRKLQPTRAA  180
GPLATVPPAA AYYSVLADPL LQGGAGGAAI SVASGLAPIG GQQGLVPVFA VPSAAGAAGG  240
NHMIPQATAV WMVPQPAGAP NQPTQYWAFQ SAPQLINLAG AQTMPPGAVF PNVAADYHQQ  300
QQSASTVVQN TNSDHQQFSH HLTGESHEQQ RRDHHPEEDD ADDDDEPVSD SSPED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-46	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG077040.1