PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG077670.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1418aa MW: 161144 Da PI: 6.4878

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG077670.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	94.3	1e-29	1342	1414	3	74
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLK 74 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r frkDG++w+kkk+g tv+E+he+L TRIDC5BG077670.3 1342 KEaQTRWLRPTEICEILKNYRNFHIAPEPPNMPASGSLFLFDRKVLRLFRKDGHNWRKKKNGTTVKEAHERLT 1414 5559*******************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 1418 aa Download sequence
MEYKVCTRSD LEKMLVDETA EPRDLPLSLL KDITNDFSDD LKIGSGRFSV VYKGILGDKS 60 VAVKKLSNAY MHEREFHQEV ECLMRVKHKN IVRFLGYCAD TQGTMASYNG KLVMEEVHQS 120 LLCFEYIPNG SLDKYITDAY REWRTCYKII KGISEGLQFL HENHIIRLDL KPANILLDDS 180 MVPKITDFRL SRCFHENQRQ DITKTTLGTM GYLAPELLEG DAITCSADLY SLGAIITEIL 240 TGQKGYQATE EVLESWSDRM ERSQRDTLLE QIRVCYEIAL ECRDFSPKKR PASGRDIVDR 300 VREMEGIQAE MGSSLAVMSA MDDALVNSSL ADIGAMNAPV SSSLGVMGPL LRKLDSLLLL 360 GCRLRGPLKD RVVLLREDLE EISVALVEQS MVDSPNEMAK YWMNEVRELC YDIEDFIDDM 420 MLTHADAKMR SVQSFKVGRV KIPWLPKKVR PCTRAAKFAE LRAPVREAIE RHGRYLDGFT 480 SSSRSLFTVY GHIPLMYAEA ANYLVGVNDA NTKLVKWLTN EKEQQLKMVA ITGHSGVGKT 540 ALAKQLYREV EEQFDCRAFV RASRKPDMRR LLGGILSQVQ QHRCPTNSYT VQNLIDKLTE 600 HLQNKRYVIV IDDLWETTSW DIVASAFPEG NNCSRIITTT EIEGVALECC DYQSDNILKM 660 KPLGGEDSGK LLLNLVFGPE RLCPEQLKGA SDIIIAKCAG LPLATICVSG LLATQPDNPK 720 LWLHVQEFLC SNLSTNSTLE ETLHETLKLS YNSLPHYLKT CLMYLCLYPE GCTIWKFDLI 780 KQWIAEDFIC AIEGTDTAEV ADSYFEELVN RGMIQPVDIN YSGEVLSCTL HHVVLDLITL 840 ESTEERFITA LDYSQTIRGH YSKVRRLSLH FSNPRYAKKP TGLTLSKVRS IGFFGILKCA 900 PTIVGFKHLR VLILEFWGDQ WGIMSFDLTR ICRFFQLRYL KISCDASVEV ELPTQMRMLR 960 YLETLIIDAA VSAVPSDIIH LPGLLHLSLG DKTDLPDEVG RIRSLRVLHC FNLSSNSEDN 1020 VLSLGDLLNL QDLNLTYCTE ESDDHLKRNL AALASSLGKL VNLKSITLAP GASGTAIYHD 1080 VWSSVSSLPF FLQRLELLPP ICIFSRLPQC LGQLRKLCIL TVVVSELLME DMDILTGLPA 1140 LTVFSLYVRQ PTLESIIFKK RAFLGLKCFK YTCGVLSLTF QEEAFPNLQR LELSFNAHRG 1200 EQYYDFLSGI GYLLNLKEIA GTIGAAKDAE ESDRRVAESA FTDAIRKHPR FPSYNHVKRV 1260 DWVHEEYQLR TQAKDSSREK YETLEKQHGR KEGDSLHEQT RILLKETGEE TKQCTNSWSS 1320 YFPATESIIF DQMKSDMEQI LKEAQTRWLR PTEICEILKN YRNFHIAPEP PNMPASGSLF 1380 LFDRKVLRLF RKDGHNWRKK KNGTTVKEAH ERLTSQIN

Sequence ? help Back to Top

Protein Sequence Length: 1418 aa Download sequence

MEYKVCTRSD LEKMLVDETA EPRDLPLSLL KDITNDFSDD LKIGSGRFSV VYKGILGDKS  60
VAVKKLSNAY MHEREFHQEV ECLMRVKHKN IVRFLGYCAD TQGTMASYNG KLVMEEVHQS  120
LLCFEYIPNG SLDKYITDAY REWRTCYKII KGISEGLQFL HENHIIRLDL KPANILLDDS  180
MVPKITDFRL SRCFHENQRQ DITKTTLGTM GYLAPELLEG DAITCSADLY SLGAIITEIL  240
TGQKGYQATE EVLESWSDRM ERSQRDTLLE QIRVCYEIAL ECRDFSPKKR PASGRDIVDR  300
VREMEGIQAE MGSSLAVMSA MDDALVNSSL ADIGAMNAPV SSSLGVMGPL LRKLDSLLLL  360
GCRLRGPLKD RVVLLREDLE EISVALVEQS MVDSPNEMAK YWMNEVRELC YDIEDFIDDM  420
MLTHADAKMR SVQSFKVGRV KIPWLPKKVR PCTRAAKFAE LRAPVREAIE RHGRYLDGFT  480
SSSRSLFTVY GHIPLMYAEA ANYLVGVNDA NTKLVKWLTN EKEQQLKMVA ITGHSGVGKT  540
ALAKQLYREV EEQFDCRAFV RASRKPDMRR LLGGILSQVQ QHRCPTNSYT VQNLIDKLTE  600
HLQNKRYVIV IDDLWETTSW DIVASAFPEG NNCSRIITTT EIEGVALECC DYQSDNILKM  660
KPLGGEDSGK LLLNLVFGPE RLCPEQLKGA SDIIIAKCAG LPLATICVSG LLATQPDNPK  720
LWLHVQEFLC SNLSTNSTLE ETLHETLKLS YNSLPHYLKT CLMYLCLYPE GCTIWKFDLI  780
KQWIAEDFIC AIEGTDTAEV ADSYFEELVN RGMIQPVDIN YSGEVLSCTL HHVVLDLITL  840
ESTEERFITA LDYSQTIRGH YSKVRRLSLH FSNPRYAKKP TGLTLSKVRS IGFFGILKCA  900
PTIVGFKHLR VLILEFWGDQ WGIMSFDLTR ICRFFQLRYL KISCDASVEV ELPTQMRMLR  960
YLETLIIDAA VSAVPSDIIH LPGLLHLSLG DKTDLPDEVG RIRSLRVLHC FNLSSNSEDN  1020
VLSLGDLLNL QDLNLTYCTE ESDDHLKRNL AALASSLGKL VNLKSITLAP GASGTAIYHD  1080
VWSSVSSLPF FLQRLELLPP ICIFSRLPQC LGQLRKLCIL TVVVSELLME DMDILTGLPA  1140
LTVFSLYVRQ PTLESIIFKK RAFLGLKCFK YTCGVLSLTF QEEAFPNLQR LELSFNAHRG  1200
EQYYDFLSGI GYLLNLKEIA GTIGAAKDAE ESDRRVAESA FTDAIRKHPR FPSYNHVKRV  1260
DWVHEEYQLR TQAKDSSREK YETLEKQHGR KEGDSLHEQT RILLKETGEE TKQCTNSWSS  1320
YFPATESIIF DQMKSDMEQI LKEAQTRWLR PTEICEILKN YRNFHIAPEP PNMPASGSLF  1380
LFDRKVLRLF RKDGHNWRKK KNGTTVKEAH ERLTSQIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	7e-35	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG077670.3