PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG079080.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 822aa MW: 92239.2 Da PI: 6.8864

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG079080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	5.8e-18	118	202	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++leHnH+l+p TRIDC5BG079080.3 118 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLEHNHPLNP 202 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
PARPRPPARH RLASTQAQAQ YCRPTDSLGP APVSPGSKGL AAMADLIPGE GELAFGGNQD 60 DDDAEDASPG SKELAAMVEA AAAASVELDA AADRAPPYGD DRTPRDGMVF KSYEEVLNFY 120 KRYALRTGFG VCVKKSSFTK AGLCRRLLLV CNRWGNGKED ACYQARPTAK TNCQATVVAR 180 LWGDGMLHLT DVSLEHNHPL NPSAARFLRC YKTLPSGMSK DLVVRAARGE CATSGGDVEA 240 PPMFDDWGRL KIRDGDVQAI NCFFAEMQAK QPNFFYVMDF YVEGHLRSVL WADSRSREAY 300 QYFSDAIWVD TTCLRSKFNV PLVLFLGVNH HGQLVLLGCG LLSDESTESL LWLFKAWLTC 360 MKGRLPGAMI TDESVAIKAA VREVFPKTRH RISDWHIVRS IAEKLGELPE YESIKVQMEA 420 VIYGSLKDDQ FETRWKNLIN RFSLQDNEWV IFLYENRHLW VPSFLKDAFW AGLSVNHRES 480 PGAFFDGSVS HETTLVSFLS NYMILVQYKY KMEQQDDFES LTSGRVLVSK FPMEEQISKL 540 YTMNMFVKFQ DELKSTLDCQ VQQVSPSSFV VIDLAEQGTG LVTRKYEVVH CMETNRMECN 600 CGLFQFSGIV CRHALSVLKW QQVYDIPPCY VLNRWRSDFK QLHALDNPLK DPLVASNHVE 660 RYDHISLQCL RLVEIGMVSD DKYQHALKLI SDMKRTLLDD NLCRELEQKM SPPERAVVVN 720 GDSHAQPGSS EGGPAKKRRG RPPKRSKEIS VESVSNQCGN KESLLVSSDV SQKGALHSSS 780 TASNLGTHVR AHGVDDLMVV SIINIWLLNS LSDMRILTMT LF

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

PARPRPPARH RLASTQAQAQ YCRPTDSLGP APVSPGSKGL AAMADLIPGE GELAFGGNQD  60
DDDAEDASPG SKELAAMVEA AAAASVELDA AADRAPPYGD DRTPRDGMVF KSYEEVLNFY  120
KRYALRTGFG VCVKKSSFTK AGLCRRLLLV CNRWGNGKED ACYQARPTAK TNCQATVVAR  180
LWGDGMLHLT DVSLEHNHPL NPSAARFLRC YKTLPSGMSK DLVVRAARGE CATSGGDVEA  240
PPMFDDWGRL KIRDGDVQAI NCFFAEMQAK QPNFFYVMDF YVEGHLRSVL WADSRSREAY  300
QYFSDAIWVD TTCLRSKFNV PLVLFLGVNH HGQLVLLGCG LLSDESTESL LWLFKAWLTC  360
MKGRLPGAMI TDESVAIKAA VREVFPKTRH RISDWHIVRS IAEKLGELPE YESIKVQMEA  420
VIYGSLKDDQ FETRWKNLIN RFSLQDNEWV IFLYENRHLW VPSFLKDAFW AGLSVNHRES  480
PGAFFDGSVS HETTLVSFLS NYMILVQYKY KMEQQDDFES LTSGRVLVSK FPMEEQISKL  540
YTMNMFVKFQ DELKSTLDCQ VQQVSPSSFV VIDLAEQGTG LVTRKYEVVH CMETNRMECN  600
CGLFQFSGIV CRHALSVLKW QQVYDIPPCY VLNRWRSDFK QLHALDNPLK DPLVASNHVE  660
RYDHISLQCL RLVEIGMVSD DKYQHALKLI SDMKRTLLDD NLCRELEQKM SPPERAVVVN  720
GDSHAQPGSS EGGPAKKRRG RPPKRSKEIS VESVSNQCGN KESLLVSSDV SQKGALHSSS  780
TASNLGTHVR AHGVDDLMVV SIINIWLLNS LSDMRILTMT LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-116	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG079080.3