PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG079080.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 758aa MW: 86300.2 Da PI: 7.2328

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG079080.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.3	5.2e-18	9	93	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++leHnH+l+p TRIDC5BG079080.4 9 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLEHNHPLNP 93 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
FKSYEEVLNF YKRYALRTGF GVCVKKSSFT KAGLCRRLLL VCNRWGNGKE DACYQARPTA 60 KTNCQATVVA RLWGDGMLHL TDVSLEHNHP LNPSAARFLR CYKTLPSGMS KDLVVRAARG 120 ECATSGGDVE APPMFDDWGR LKIRDGDVQA INCFFAEMQA KQPNFFYVMD FYVEGHLRSV 180 LWADSRSREA YQYFSDAIWV DTTCLRSKFN VPLVLFLGVN HHGQLVLLGC GLLSDESTES 240 LLWLFKAWLT CMKGRLPGAM ITDESVAIKA AVREVFPKTR HRISDWHIVR SIAEKLGELP 300 EYESIKVQME AVIYGSLKDD QFETRWKNLI NRFSLQDNEW VIFLYENRHL WVPSFLKDAF 360 WAGLSVNHRE SPGAFFDGSV SHETTLVSFL SNYMILVQYK YKMEQQDDFE SLTSGRVLVS 420 KFPMEEQISK LYTMNMFVKF QDELKSTLDC QVQQVSPSSF VVIDLAEQGT GLVTRKYEVV 480 HCMETNRMEC NCGLFQFSGI VCRHALSVLK WQQVYDIPPC YVLNRWRSDF KQLHALDNPL 540 KDPLVASNHV ERYDHISLQC LRLVEIGMVS DDKYQHALKL ISDMKRTLLD DNLCRELEQK 600 MSPPERAVVV NGDSHAQPGS SEGGPAKKRR GRPPKRSKEI SVESVSNQCG NKESLLVSSD 660 VSQKGALHSS STASNLGTHV RAHGVDDLME EVNANEVSFE SRYGVQSSHP NHYGDQLHPG 720 HTLQFGQHMP SAEQSRGVEW VYPTIYQDDQ VPYGRRTS

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

FKSYEEVLNF YKRYALRTGF GVCVKKSSFT KAGLCRRLLL VCNRWGNGKE DACYQARPTA  60
KTNCQATVVA RLWGDGMLHL TDVSLEHNHP LNPSAARFLR CYKTLPSGMS KDLVVRAARG  120
ECATSGGDVE APPMFDDWGR LKIRDGDVQA INCFFAEMQA KQPNFFYVMD FYVEGHLRSV  180
LWADSRSREA YQYFSDAIWV DTTCLRSKFN VPLVLFLGVN HHGQLVLLGC GLLSDESTES  240
LLWLFKAWLT CMKGRLPGAM ITDESVAIKA AVREVFPKTR HRISDWHIVR SIAEKLGELP  300
EYESIKVQME AVIYGSLKDD QFETRWKNLI NRFSLQDNEW VIFLYENRHL WVPSFLKDAF  360
WAGLSVNHRE SPGAFFDGSV SHETTLVSFL SNYMILVQYK YKMEQQDDFE SLTSGRVLVS  420
KFPMEEQISK LYTMNMFVKF QDELKSTLDC QVQQVSPSSF VVIDLAEQGT GLVTRKYEVV  480
HCMETNRMEC NCGLFQFSGI VCRHALSVLK WQQVYDIPPC YVLNRWRSDF KQLHALDNPL  540
KDPLVASNHV ERYDHISLQC LRLVEIGMVS DDKYQHALKL ISDMKRTLLD DNLCRELEQK  600
MSPPERAVVV NGDSHAQPGS SEGGPAKKRR GRPPKRSKEI SVESVSNQCG NKESLLVSSD  660
VSQKGALHSS STASNLGTHV RAHGVDDLME EVNANEVSFE SRYGVQSSHP NHYGDQLHPG  720
HTLQFGQHMP SAEQSRGVEW VYPTIYQDDQ VPYGRRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-115	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG079080.4