PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG079080.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 791aa MW: 88823.3 Da PI: 6.4704

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG079080.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.2	5.5e-18	101	185	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++leHnH+l+p TRIDC5BG079080.5 101 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLEHNHPLNP 185 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
QAQYCRPTDS LGPAPVSPGS KGLAAMADLI PGEGELAFGG NQDDDDAEDA SPGSKELAAM 60 VEAAAAASVE LDAAADRAPP YGDDRTPRDG MVFKSYEEVL NFYKRYALRT GFGVCVKKSS 120 FTKAGLCRRL LLVCNRWGNG KEDACYQARP TAKTNCQATV VARLWGDGML HLTDVSLEHN 180 HPLNPSAARF LRCYKTLPSG MSKDLVVRAA RGECATSGGD VEAPPMFDDW GRLKIRDGDV 240 QAINCFFAEM QAKQPNFFYV MDFYVEGHLR SVLWADSRSR EAYQYFSDAI WVDTTCLRSK 300 FNVPLVLFLG VNHHGQLVLL GCGLLSDEST ESLLWLFKAW LTCMKGRLPG AMITDESVAI 360 KAAVREVFPK TRHRISDWHI VRSIAEKLGE LPEYESIKVQ MEAVIYGSLK DDQFETRWKN 420 LINRFSLQDN EWVIFLYENR HLWVPSFLKD AFWAGLSVNH RESPGAFFDG SVSHETTLVS 480 FLSNYMILVQ YKYKMEQQDD FESLTSGRVL VSKFPMEEQI SKLYTMNMFV KFQDELKSTL 540 DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE VVHCMETNRM ECNCGLFQFS GIVCRHALSV 600 LKWQQVYDIP PCYVLNRWRS DFKQLHALDN PLKDPLVASN HVERYDHISL QCLRLVEIGM 660 VSDDKYQHAL KLISDMKRTL LDDNLCRELE QKMSPPERAV VVNGDSHAQP GSSEGGPAKK 720 RRGRPPKRSK EISVESVESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV DDLMVVSIIN 780 IWLLNSLSDM R

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

QAQYCRPTDS LGPAPVSPGS KGLAAMADLI PGEGELAFGG NQDDDDAEDA SPGSKELAAM  60
VEAAAAASVE LDAAADRAPP YGDDRTPRDG MVFKSYEEVL NFYKRYALRT GFGVCVKKSS  120
FTKAGLCRRL LLVCNRWGNG KEDACYQARP TAKTNCQATV VARLWGDGML HLTDVSLEHN  180
HPLNPSAARF LRCYKTLPSG MSKDLVVRAA RGECATSGGD VEAPPMFDDW GRLKIRDGDV  240
QAINCFFAEM QAKQPNFFYV MDFYVEGHLR SVLWADSRSR EAYQYFSDAI WVDTTCLRSK  300
FNVPLVLFLG VNHHGQLVLL GCGLLSDEST ESLLWLFKAW LTCMKGRLPG AMITDESVAI  360
KAAVREVFPK TRHRISDWHI VRSIAEKLGE LPEYESIKVQ MEAVIYGSLK DDQFETRWKN  420
LINRFSLQDN EWVIFLYENR HLWVPSFLKD AFWAGLSVNH RESPGAFFDG SVSHETTLVS  480
FLSNYMILVQ YKYKMEQQDD FESLTSGRVL VSKFPMEEQI SKLYTMNMFV KFQDELKSTL  540
DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE VVHCMETNRM ECNCGLFQFS GIVCRHALSV  600
LKWQQVYDIP PCYVLNRWRS DFKQLHALDN PLKDPLVASN HVERYDHISL QCLRLVEIGM  660
VSDDKYQHAL KLISDMKRTL LDDNLCRELE QKMSPPERAV VVNGDSHAQP GSSEGGPAKK  720
RRGRPPKRSK EISVESVESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV DDLMVVSIIN  780
IWLLNSLSDM R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-116	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG079080.5