PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG082200.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 507aa    MW: 55684.7 Da    PI: 4.7143
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG082200.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.44.8e-33341282103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksFkkgkke 92 
                       Fl+k+y++++d++++ ++sw   +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+Y  gF+kv+ ++         weF+++ F +g+k+
  TRIDC5BG082200.3  34 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYvrGFRKVDPDK---------WEFANEGFLRGQKH 117
                       9********************999***********************************999****9999.........************** PP

                       XXXXXXXXXXX CS
      HSF_DNA-bind  93 llekikrkkse 103
                       ll++i+r+k +
  TRIDC5BG082200.3 118 LLKTINRRKPS 128
                       ********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
VASAAAAAAA ASSTVTTAVA PPGAGAGAGA PPPFLMKTYD MVDDPATDAV VSWGPANNSF  60
IVWNTPEFAR DLLPKYFKHN NFSSFVRQLN TYVRGFRKVD PDKWEFANEG FLRGQKHLLK  120
TINRRKPSHA NNQVQLQNAP MPSCVEVGKF GMEEEIEMLK RDKNVLMQEL VRLRQQQQTT  180
DHQLQTLGKR LHGMEQRQQQ MMSFLAKAMQ SPGFLAQFVQ QNENSKRRIV AANKKRRLPK  240
QDDGLNPESA LLDGQIIKYQ PMINEAAKAM LRKILQQDTS PHRFESMGNS DNLLLENCMP  300
SAQTFDSSSS TRNSAVTLAE VPGNSGMPYM PTSSGLSAIC SSSTPPEMQC PVLDSNSSTQ  360
LPTQLPNMSA ASSIPKAMTP GLSDISIPGF PDLHDLITED AINIPVENFA MPGPECIFPL  420
PDEGSDDSVP MDPIDTDETD DTQKLPGIID SFWEQFLCAS PLSIDNDEVD SGLLDTREAQ  480
EENGWTRTEN LANLTEQMGL LSSNHRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-120HSF family protein