PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG082200.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 114aa    MW: 12698.7 Da    PI: 8.4716
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG082200.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind81.99.5e-26664260
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                      Fl+k+y++++d++++ ++sw   +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+Y
  TRIDC5BG082200.4  6 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTY 64
                      9********************999**********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
GAPPPFLMKT YDMVDDPATD AVVSWGPANN SFIVWNTPEF ARDLLPKYFK HNNFSSFVRQ  60
LNTYVRALPF TPSSPLLAPA PLCFHFLGGL PTVSLPPTAI KIRVFLGVYE SRID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.19e-36HSF family protein