PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG082200.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 491aa MW: 55095.9 Da PI: 4.8207

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG082200.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.8	1.1e-35	3	95	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++ ++sw +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll TRIDC5BG082200.5 3 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLRGQKHLL 86 9******************999*************************************999.........************ PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 ++i+r+k + TRIDC5BG082200.5 87 KTINRRKPS 95 ****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
PPFLMKTYDM VDDPATDAVV SWGPANNSFI VWNTPEFARD LLPKYFKHNN FSSFVRQLNT 60 YGFRKVDPDK WEFANEGFLR GQKHLLKTIN RRKPSHANNQ VQVPQQQQHH QQQHQQQPQL 120 QNAPMPSCVE VGKFGMEEEI EMLKRDKNVL MQELVRLRQQ QQTTDHQLQT LGKRLHGMEQ 180 RQQQMMSFLA KAMQSPGFLA QFVQQNENSK RRIVAANKKR RLPKQDDGLN PESALLDGQI 240 IKYQPMINEA AKAMLRKILQ QDTSPHRFES MGNSDNLLLE NCMPSAQTFD SSSSTRNSAV 300 TLAEVPGNSG MPYMPTSSGL SAICSSSTPP EMQCPVLDSN SSTQLPTQLP NMSAASSIPK 360 AMTPGLSDIS IPGFPDLHDL ITEDAINIPV ENFAMPGPEC IFPLPDEGSD DSVPMDPIDT 420 DETDDTQKLP GIIDSFWEQF LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE 480 QMGLLSSNHR G

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

PPFLMKTYDM VDDPATDAVV SWGPANNSFI VWNTPEFARD LLPKYFKHNN FSSFVRQLNT  60
YGFRKVDPDK WEFANEGFLR GQKHLLKTIN RRKPSHANNQ VQVPQQQQHH QQQHQQQPQL  120
QNAPMPSCVE VGKFGMEEEI EMLKRDKNVL MQELVRLRQQ QQTTDHQLQT LGKRLHGMEQ  180
RQQQMMSFLA KAMQSPGFLA QFVQQNENSK RRIVAANKKR RLPKQDDGLN PESALLDGQI  240
IKYQPMINEA AKAMLRKILQ QDTSPHRFES MGNSDNLLLE NCMPSAQTFD SSSSTRNSAV  300
TLAEVPGNSG MPYMPTSSGL SAICSSSTPP EMQCPVLDSN SSTQLPTQLP NMSAASSIPK  360
AMTPGLSDIS IPGFPDLHDL ITEDAINIPV ENFAMPGPEC IFPLPDEGSD DSVPMDPIDT  420
DETDDTQKLP GIIDSFWEQF LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE  480
QMGLLSSNHR G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-122	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG082200.5