PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG083350.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 127aa    MW: 14871 Da    PI: 11.3697
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG083350.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.14.2e-2235115286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       W++ e+++Li++++++++rlrrg+lk+++We+v++ +  r +g +++ +qC++k+e+l+kry+ ++++         s +p+f+++e
  TRIDC5BG083350.9  35 WSDGETMHLIDVYEDRWTRLRRGQLKAHQWEDVAADVtrRCGGQRKTGTQCRHKLEKLRKRYRTEAARPVT------SLWPFFRRME 115
                       *************************************877889999******************9998885......68*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
PLPPSLFPPD PDLNRRPPPR GHPMEARKSA PGQPWSDGET MHLIDVYEDR WTRLRRGQLK  60
AHQWEDVAAD VTRRCGGQRK TGTQCRHKLE KLRKRYRTEA ARPVTSLWPF FRRMERLERG  120
PVPVSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.11e-23Trihelix family protein