PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001250.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 103aa    MW: 10997.4 Da    PI: 9.6306
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001250.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.73.2e-284594251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqvtfskRr g+lKKA+EL vLCdaeva+i+fs++g+lyey+s
  TRIDC6AG001250.2 45 RIEDATSRQVTFSKRRSGLLKKAFELGVLCDAEVALIVFSPRGRLYEYAS 94
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
APSSPPAAAV AAEGDEQQQQ IVVAAAAAAA AKKGGGKRGR REMRRIEDAT SRQVTFSKRR  60
SGLLKKAFEL GVLCDAEVAL IVFSPRGRLY EYASAPEYFA END
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.14e-29MIKC_MADS family protein