PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001250.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25389.9 Da    PI: 8.8679
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001250.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.41.6e-27958251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqvtfskRr g+lKKA+EL vLCdaeva+i+fs++g+lyey+s
  TRIDC6AG001250.6  9 RIEDATSRQVTFSKRRSGLLKKAFELGVLCDAEVALIVFSPRGRLYEYAS 58
                      8***********************************************86 PP
2K-box74.53e-2582175699
             K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       ++++ +a  + ++ e++ Lk +i+ ++  qR+l Ge+L+s+s  eLq+Le qLeksl+ iR+kK++ +l++i el++ke++l  en  Lrk++
  TRIDC6AG001250.6  82 TVEQPAAGVQMCRSEATALKHKIDAIEAYQRKLSGEGLGSCSAHELQELELQLEKSLSCIRQKKQQKMLDKILELKEKERKLLTENSVLRKEY 174
                       444677888999******************************************************************************998 PP

             K-box  99 e 99 
                       +
  TRIDC6AG001250.6 175 K 175
                       6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
KRGRREMRRI EDATSRQVTF SKRRSGLLKK AFELGVLCDA EVALIVFSPR GRLYEYASAP  60
DLQKTIDRYL NHTKGTSTNE KTVEQPAAGV QMCRSEATAL KHKIDAIEAY QRKLSGEGLG  120
SCSAHELQEL ELQLEKSLSC IRQKKQQKML DKILELKEKE RKLLTENSVL RKEYKALPLL  180
ELATAAAAER SPDGAGAEEA EEDERRRHYM EVETELVIGR PGSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-49MIKC_MADS family protein