PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001260.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 271aa    MW: 30082.1 Da    PI: 6.4232
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001260.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.74.4e-07192212121
           G2-like   1 kprlrWtpeLHerFveaveqL 21 
                       k++++Wt+e+He Fv+av+qL
  TRIDC6AG001260.2 192 KKKVKWTTEMHELFVNAVSQL 212
                       689*****************9 PP
2Response_reg41.95.2e-15211291108
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 
                       vl vdD+p+ ++ l+q+l++ gy ev++ +++ +al+ ++++   +D i++  +  g  mdG+ l+k+  +    + ++++++ +++e++++ 
  TRIDC6AG001260.2  21 VLAVDDDPVCLQTLTQMLRRGGY-EVTASASPADALKEVEKNPdgIDFIMTVARTRGrgMDGFGLVKRVGKCY--PVVLMFSGDETMETRERG 110
                       799********************.99999999999999988888999999987777666**********7766..699999************ PP

                       HHTTESEEEESS--HHHHH CS
      Response_reg  90 lkaGakdflsKpfdpeelv 108
                       l+ Ga     Kp    +++
  TRIDC6AG001260.2 111 LQEGACYLMDKPLRDMQIY 129
                       ************9988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MANGDEDMAT TELMGTEGLK VLAVDDDPVC LQTLTQMLRR GGYEVTASAS PADALKEVEK  60
NPDGIDFIMT VARTRGRGMD GFGLVKRVGK CYPVVLMFSG DETMETRERG LQEGACYLMD  120
KPLRDMQIYF IWQQVVRWRH KAAGAATENP NPRHSQGVHL DDTPRKRGQG LNDSNKGKGA  180
SEGGLQLGTT KKKKVKWTTE MHELFVNAVS QLKTTGDEEL IVVKEQAIQK VSHLAITHGD  240
DVHDMCQGSH DRHDVVQSAF TTLGAQWPVW W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-18ARR-B family protein